Protocols

&

Resources

 

State of the art computational tools for biology

Tamarind.bio was co-founded by Deniz Kavi, a Svensson lab undergraduate student.

 

Software & repositories

AlphaFold ligand-receptor binding prediction

These scripts will predict ligand-receptor interactions using AlphaFold version 2.3.1.

Prohormone predictor

Prohormone Predictor - this program will annotate all proteins predicted to generate peptides generated by proteolytic cleavage by the PCSK enzymes.

Proteomic profiler

A web app for determining the subcellular location of proteins (by UniProtID).

Phosphoproteomic analyses

Scripts to run phosphoproteomic analyses.


Plasmids & reagents

Svensson Lab plasmids can be found at Addgene.

We have made the C57BL/6-Ism1-flox mice (#036776) available at JAX.

For other plasmids, proteins or reagents, please email katrinjs(at)stanford.edu